对于我正在实现的聚类算法,我想随机初始化聚类分配.但是,我需要没有差距.也就是说,这不行:
set.seed(2)
K <- 10 # initial number of clusters
N <- 20 # number of data points
z_init <- sample(K,N, replace=TRUE) # initial assignments
z_init
# [1] 2 8 6 2 10 10 2 9 5 6 6 3 8 2 5 9 10 3 5 1
sort(unique(z_init))
# [1] 1 2 3 5 6 8 9 10
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标签4和7未使用的地方.
相反,我希望这个向量是:
# [1] 2 6 5 2 8 8 2 7 4 5 5 3 6 2 4 7 8 3 4 1
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其中标签5变为4等等以填充下部空标签.
更多例子:
1 2 3 5 6 8应该是?1 2 3 4 5 6 715,5,7,7,10应该是?1 2 3 3 4可以避免for循环吗?我不需要它很快,我更喜欢它优雅而简短,因为我只在代码中执行一次(用于标签初始化).
我的解决方案使用for循环
z_init <- c(3,2,1,3,3,7,9)
idx <- order(z_init)
for (i in 2:length(z_init)){
if(z_init[idx[i]] > z_init[idx[i-1]]){
z_init[idx[i]] <- z_init[idx[i-1]]+1
}
else{
z_init[idx[i]] <- z_init[idx[i-1]]
}
}
z_init
# 3 2 1 3 3 4 5
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编辑:@GregSnow 提出了当前最短的答案。我百分百确信这是最短的方法。
为了好玩,我决定把代码写得尽可能短:
z <- c(3, 8, 4, 4, 8, 2, 3, 9, 5, 1, 4)
# solution by hand: 1 2 3 3 4 4 4 5 6 6 7
sort(c(factor(z))) # 18 bits, as proposed by @GregSnow in the comments
# [1] 1 2 3 3 4 4 4 5 6 6 7
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其他一些(有效的)尝试:
y=table(z);rep(seq(y),y) # 24 bits
sort(unclass(factor(z))) # 24 bits, based on @GregSnow 's answer
diffinv(diff(sort(z))>0)+1 # 26 bits
sort(as.numeric(factor(z))) # 27 bits, @GregSnow 's original answer
rep(seq(unique(z)),table(z)) # 28 bits
cumsum(c(1,diff(sort(z))>0)) # 28 bits
y=rle(sort(z))$l;rep(seq(y),y) # 30 bits
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Edit2:只是为了表明位并不是一切:
z <- sample(1:10,10000,replace=T)
Unit: microseconds
expr min lq mean median uq max neval
sort(c(factor(z))) 2550.128 2572.2340 2681.4950 2646.6460 2729.7425 3140.288 100
{ y = table(z) rep(seq(y), y) } 2436.438 2485.3885 2580.9861 2556.4440 2618.4215 3070.812 100
sort(unclass(factor(z))) 2535.127 2578.9450 2654.7463 2623.9470 2708.6230 3167.922 100
diffinv(diff(sort(z)) > 0) + 1 551.871 572.2000 628.6268 626.0845 666.3495 940.311 100
sort(as.numeric(factor(z))) 2603.814 2672.3050 2762.2030 2717.5050 2790.7320 3558.336 100
rep(seq(unique(z)), table(z)) 2541.049 2586.0505 2733.5200 2674.0815 2760.7305 5765.815 100
cumsum(c(1, diff(sort(z)) > 0)) 530.159 545.5545 602.1348 592.3325 632.0060 844.385 100
{ y = rle(sort(z))$l rep(seq(y), y) } 661.218 684.3115 727.4502 724.1820 758.3280 857.412 100
z <- sample(1:100000,replace=T)
Unit: milliseconds
expr min lq mean median uq max neval
sort(c(factor(z))) 84.501189 87.227377 92.13182 89.733291 94.16700 150.08327 100
{ y = table(z) rep(seq(y), y) } 78.951701 82.102845 85.54975 83.935108 87.70365 106.05766 100
sort(unclass(factor(z))) 84.958711 87.273366 90.84612 89.317415 91.85155 121.99082 100
diffinv(diff(sort(z)) > 0) + 1 9.784041 9.963853 10.37807 10.090965 10.34381 17.26034 100
sort(as.numeric(factor(z))) 85.917969 88.660145 93.42664 91.542263 95.53720 118.44512 100
rep(seq(unique(z)), table(z)) 86.568528 88.300325 93.01369 90.577281 94.74137 118.03852 100
cumsum(c(1, diff(sort(z)) > 0)) 9.680615 9.834175 10.11518 9.963261 10.16735 14.40427 100
{ y = rle(sort(z))$l rep(seq(y), y) } 12.842614 13.033085 14.73063 13.294019 13.66371 133.16243 100
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