ter*_*ten 6 mysql innodb import percona-server ssd
在配置我们的新服务器(IBM X3650M4、2x Intel Xeon E5-2620、64G RAM、RAID 10(4x 240G SSD))时,我们遇到了一个奇怪的问题。我们试图将转储 ( mydumper) 从我们的(旧)生产环境导入到我们的新环境中,但我们几乎无法这样做。
转储为47G(压缩),+/- 4500 个表,最大的表为 7.1G(54285914 行)、2.2G、1.7G 和 1.7G。
我们试图myloader用 12 个(或 8 个)线程运行,但大多数时候都失败了。几分钟后,myloader遇到大桌子和摊位。一些工具显示没有更多活动(htop没有 CPU 负载,iostat没有写入或读取),mytop显示 4 个(长时间运行)永远不会完成的查询,大多数innotop屏幕都被冻结(因为SHOW INNODB STATUS不再返回任何结果)。当我尝试重新启动时mysql也失败了,因为mysql无法杀死多个线程。唯一的补救方法是使用killall -9 mysqld mysql.
我们正在使用以下 mysql 配置:
# cat /etc/mysql/my.cnf
# Ansible managed
[client]
port = 3306
socket = /var/run/mysqld/mysqld.sock
ssl_cert = /etc/mysql/client-cert.pem
ssl_key = /etc/mysql/client-key.pem
[mysqld_safe]
socket = /var/run/mysqld/mysqld.sock
nice = 0
[mysqld]
user = mysql
socket = /var/run/mysqld/mysqld.sock
pid_file = /var/run/mysqld/mysqld.pid
port = 3306
basedir = /usr
datadir = /var/lib/mysql
tmpdir = /tmp
lc_messages_dir = /usr/share/mysql
general_log = 0
general_log_file = /var/log/mysql/mysql.log
log_error = /var/log/mysql/error.log
log_queries_not_using_indexes = 0
slow_query_log = 0
slow_query_log_file = /var/log/mysql/mysql-slow.log
skip_external_locking = 1
skip_name_resolve = 1
max_connections = 1000
wait_timeout = 28800
interactive_timeout = 28800
sql_mode = NO_ENGINE_SUBSTITUTION,STRICT_TRANS_TABLES
character_set_server = utf8
collation_server = utf8_general_ci
skip-character-set-client-handshake
init_connect='SET collation_connection = utf8_general_ci; SET NAMES utf8;'
default_storage_engine = InnoDB
key_buffer_size = 32M
myisam_recover_options = FORCE,BACKUP
thread_stack = 256K
thread_cache_size = 500
query_cache_type = 0
query_cache_limit = 2M
query_cache_size = 64M
max_allowed_packet = 256M
group_concat_max_len = 256M
tmp_table_size = 256M
max_heap_table_size = 64M
open_files_limit = 65535
innodb_open_files = 8192
table_definition_cache = 8192
table_open_cache = 8192
expire_logs_days = 7
max_binlog_size = 1G
innodb_buffer_pool_size = 32G
innodb_additional_mem_pool_size = 64M
innodb_log_file_size = 512M
innodb_log_buffer_size = 16M
innodb_flush_log_at_trx_commit = 2
innodb_flush_method = O_DIRECT
innodb_thread_concurrency = 0
innodb_write_io_threads = 8
innodb_read_io_threads = 8
innodb_io_capacity = 25000
innodb_file_per_table
innodb_stats_on_metadata = 0
innodb_adaptive_flushing_method = keep_average
innodb_flush_neighbor_pages = none
log_warnings_suppress = 1592
query_response_time_stats = 1
ssl_ca = /etc/mysql/ca-cert.pem
ssl_cert = /etc/mysql/server-cert.pem
ssl_key = /etc/mysql/server-key.pem
[mysqldump]
quick
quote-names
max_allowed_packet = 256M
[mysql]
[isamchk]
key_buffer_size = 32M
!includedir /etc/mysql/conf.d/
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我们使用以下 ext4 挂载选项:
defaults,noatime,nobarrier
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我们正在使用以下raid(控制器)设置:
# ./MegaCli64 -LDInfo -Lall -aAll
Adapter 0 -- Virtual Drive Information:
Virtual Drive: 0 (Target Id: 0)
Name :
RAID Level : Primary-1, Secondary-0, RAID Level Qualifier-0
Size : 445.171 GB
Sector Size : 512
Is VD emulated : No
Mirror Data : 445.171 GB
State : Optimal
Strip Size : 128 KB
Number Of Drives per span:2
Span Depth : 2
Default Cache Policy: WriteThrough, ReadAhead, Direct, No Write Cache if Bad BBU
Current Cache Policy: WriteThrough, ReadAhead, Direct, No Write Cache if Bad BBU
Default Access Policy: Read/Write
Current Access Policy: Read/Write
Disk Cache Policy : Disabled
Encryption Type : None
PI type: No PI
Is VD Cached: No
Virtual Drive: 1 (Target Id: 1)
Name :
RAID Level : Primary-1, Secondary-0, RAID Level Qualifier-0
Size : 930.390 GB
Sector Size : 512
Is VD emulated : No
Mirror Data : 930.390 GB
State : Optimal
Strip Size : 128 KB
Number Of Drives : 2
Span Depth : 1
Default Cache Policy: WriteThrough, ReadAhead, Direct, No Write Cache if Bad BBU
Current Cache Policy: WriteThrough, ReadAhead, Direct, No Write Cache if Bad BBU
Default Access Policy: Read/Write
Current Access Policy: Read/Write
Disk Cache Policy : Disabled
Encryption Type : None
PI type: No PI
Is VD Cached: No
Exit Code: 0x00
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和
# ./MegaCli64 -AdpAllInfo -a0
Adapter #0
==============================================================================
Versions
================
Product Name : ServeRAID M5110e
Serial No : 31R0NE
FW Package Build: 23.22.0-0024
Mfg. Data
================
Mfg. Date : 01/24/13
Rework Date : 01/24/13
Revision No : 00W2671
Battery FRU :
Image Versions in Flash:
================
BIOS Version : 5.45.07.2_4.16.08.00_0x06030503
FW Version : 3.340.75-3372
NVDATA Version : 2.1312.03-0126
WebBIOS Version : 6.1-71-e_71-Rel
Preboot CLI Version: 05.07-00:#%00011
Boot Block Version : 2.05.00.00-0010
BOOT Version : 07.26.26.219
Pending Images in Flash
================
None
PCI Info
================
Controller Id : 0000
Vendor Id : 1000
Device Id : 005b
SubVendorId : 1014
SubDeviceId : 0412
Host Interface : PCIE
ChipRevision : D1
Link Speed : 0
Number of Frontend Port: 0
Device Interface : PCIE
Number of Backend Port: 8
Port : Address
0 4433221100000000
1 4433221101000000
2 4433221102000000
3 4433221103000000
4 4433221104000000
5 4433221105000000
6 0000000000000000
7 0000000000000000
HW Configuration
================
SAS Address : 500507605803cfa8
BBU : Present
Alarm : Present
NVRAM : Present
Serial Debugger : Present
Memory : Present
Flash : Present
Memory Size : 512MB
TPM : Absent
On board Expander: Absent
Upgrade Key : Present
Temperature sensor for ROC : Present
Temperature sensor for controller : Absent
ROC temperature : 59 degree Celsius
Settings
================
Current Time : 20:52:13 11/12, 2015
Predictive Fail Poll Interval : 300sec
Interrupt Throttle Active Count : 16
Interrupt Throttle Completion : 50us
Rebuild Rate : 30%
PR Rate : 30%
BGI Rate : 30%
Check Consistency Rate : 30%
Reconstruction Rate : 30%
Cache Flush Interval : 4s
Max Drives to Spinup at One Time : 2
Delay Among Spinup Groups : 12s
Physical Drive Coercion Mode : 1GB
Cluster Mode : Disabled
Alarm : Disabled
Auto Rebuild : Enabled
Battery Warning : Enabled
Ecc Bucket Size : 15
Ecc Bucket Leak Rate : 1440 Minutes
Restore HotSpare on Insertion : Disabled
Expose Enclosure Devices : Enabled
Maintain PD Fail History : Enabled
Host Request Reordering : Enabled
Auto Detect BackPlane Enabled : SGPIO/i2c SEP
Load Balance Mode : Auto
Use FDE Only : Yes
Security Key Assigned : No
Security Key Failed : No
Security Key Not Backedup : No
Default LD PowerSave Policy : Controller Defined
Maximum number of direct attached drives to spin up in 1 min : 10
Auto Enhanced Import : No
Any Offline VD Cache Preserved : No
Allow Boot with Preserved Cache : No
Disable Online Controller Reset : No
PFK in NVRAM : Yes
Use disk activity for locate : No
POST delay : 90 seconds
BIOS Error Handling : Stop On Errors
Current Boot Mode :Normal
Capabilities
================
RAID Level Supported : RAID0, RAID1, RAID5, RAID6, RAID00, RAID10, RAID50, RAID60, PRL 11, PRL 11 with spanning, SRL 3 supported, PRL11-RLQ0 DDF layout with no span, PRL11-RLQ0 DDF layout with span
Supported Drives : SAS, SATA
Allowed Mixing:
Mix in Enclosure Allowed
Status
================
ECC Bucket Count : 0
Limitations
================
Max Arms Per VD : 32
Max Spans Per VD : 8
Max Arrays : 128
Max Number of VDs : 64
Max Parallel Commands : 1008
Max SGE Count : 60
Max Data Transfer Size : 8192 sectors
Max Strips PerIO : 42
Max LD per array : 16
Min Strip Size : 8 KB
Max Strip Size : 1.0 MB
Max Configurable CacheCade Size: 0 GB
Current Size of CacheCade : 0 GB
Current Size of FW Cache : 368 MB
Device Present
================
Virtual Drives : 2
Degraded : 0
Offline : 0
Physical Devices : 7
Disks : 6
Critical Disks : 0
Failed Disks : 0
Supported Adapter Operations
================
Rebuild Rate : Yes
CC Rate : Yes
BGI Rate : Yes
Reconstruct Rate : Yes
Patrol Read Rate : Yes
Alarm Control : Yes
Cluster Support : Yes
BBU : Yes
Spanning : Yes
Dedicated Hot Spare : Yes
Revertible Hot Spares : Yes
Foreign Config Import : Yes
Self Diagnostic : Yes
Allow Mixed Redundancy on Array : No
Global Hot Spares : Yes
Deny SCSI Passthrough : No
Deny SMP Passthrough : No
Deny STP Passthrough : No
Support Security : Yes
Snapshot Enabled : No
Support the OCE without adding drives : Yes
Support PFK : Yes
Support PI : Yes
Support Boot Time PFK Change : Yes
Disable Online PFK Change : Yes
Support LDPI Type1 : No
Support LDPI Type2 : No
Support LDPI Type3 : No
PFK TrailTime Remaining : 0 days 0 hours
Support Shield State : Yes
Block SSD Write Disk Cache Change: No
Support Online FW Update : Yes
Supported VD Operations
================
Read Policy : Yes
Write Policy : Yes
IO Policy : Yes
Access Policy : Yes
Disk Cache Policy : Yes
Reconstruction : Yes
Deny Locate : No
Deny CC : No
Allow Ctrl Encryption: No
Enable LDBBM : No
Support Breakmirror : No
Power Savings : No
Supported PD Operations
================
Force Online : Yes
Force Offline : Yes
Force Rebuild : Yes
Deny Force Failed : No
Deny Force Good/Bad : No
Deny Missing Replace : No
Deny Clear : No
Deny Locate : No
Support Temperature : Yes
NCQ : Yes
Disable Copyback : No
Enable JBOD : No
Enable Copyback on SMART : No
Enable Copyback to SSD on SMART Error : Yes
Enable SSD Patrol Read : No
PR Correct Unconfigured Areas : Yes
Error Counters
================
Memory Correctable Errors : 0
Memory Uncorrectable Errors : 0
Cluster Information
================
Cluster Permitted : No
Cluster Active : No
Default Settings
================
Phy Polarity : 0
Phy PolaritySplit : 0
Background Rate : 30
Strip Size : 128kB
Flush Time : 4 seconds
Write Policy : WB
Read Policy : Adaptive
Cache When BBU Bad : Disabled
Cached IO : No
SMART Mode : Mode 6
Alarm Disable : No
Coercion Mode : 1GB
ZCR Config : Unknown
Dirty LED Shows Drive Activity : No
BIOS Continue on Error : 0
Spin Down Mode : None
Allowed Device Type : SAS/SATA Mix
Allow Mix in Enclosure : Yes
Allow HDD SAS/SATA Mix in VD : No
Allow SSD SAS/SATA Mix in VD : No
Allow HDD/SSD Mix in VD : No
Allow SATA in Cluster : No
Max Chained Enclosures : 16
Disable Ctrl-R : Yes
Enable Web BIOS : Yes
Direct PD Mapping : No
BIOS Enumerate VDs : Yes
Restore Hot Spare on Insertion : No
Expose Enclosure Devices : Yes
Maintain PD Fail History : Yes
Disable Puncturing : Yes
Zero Based Enclosure Enumeration : No
PreBoot CLI Enabled : Yes
LED Show Drive Activity : Yes
Cluster Disable : No
SAS Disable : No
Auto Detect BackPlane Enable : SGPIO/i2c SEP
Use FDE Only : Yes
Enable Led Header : No
Delay during POST : 0
EnableCrashDump : No
Disable Online Controller Reset : No
EnableLDBBM : No
Un-Certified Hard Disk Drives : Allow
Treat Single span R1E as R10 : No
Max LD per array : 16
Power Saving option : All power saving options are disabled
Default spin down time in minutes: 30
Enable JBOD : No
TTY Log In Flash : No
Auto Enhanced Import : No
BreakMirror RAID Support : No
Disable Join Mirror : No
Enable Shield State : Yes
Time taken to detect CME : 60s
Exit Code: 0x00
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和
# ./MegaCli64 -PDList -a0
Adapter #0
Enclosure Device ID: 252
Slot Number: 0
Drive's position: DiskGroup: 0, Span: 0, Arm: 0
Enclosure position: N/A
Device Id: 0
WWN: 50025385700191ba
Sequence Number: 2
Media Error Count: 0
Other Error Count: 0
Predictive Failure Count: 0
Last Predictive Failure Event Seq Number: 0
PD Type: SATA
Raw Size: 223.570 GB [0x1bf244b0 Sectors]
Non Coerced Size: 223.070 GB [0x1be244b0 Sectors]
Coerced Size: 222.585 GB [0x1bd2c000 Sectors]
Sector Size: 512
Logical Sector Size: 512
Physical Sector Size: 512
Firmware state: Online, Spun Up
Commissioned Spare : No
Emergency Spare : No
Device Firmware Level: 203Q
Shield Counter: 0
Successful diagnostics completion on : N/A
SAS Address(0): 0x4433221100000000
Connected Port Number: 0(path0)
Inquiry Data: S1G0NWAG600282 SAMSUNG MZ7WD240HCFV-00003 DXM9203Q
FDE Capable: Not Capable
FDE Enable: Disable
Secured: Unsecured
Locked: Unlocked
Needs EKM Attention: No
Foreign State: None
Device Speed: 6.0Gb/s
Link Speed: 6.0Gb/s
Media Type: Solid State Device
Drive: Not Certified
Drive Temperature :34C (93.20 F)
PI Eligibility: No
Drive is formatted for PI information: No
PI: No PI
Drive's NCQ setting : Enabled
Port-0 :
Port status: Active
Port's Linkspeed: 6.0Gb/s
Drive has flagged a S.M.A.R.T alert : No
Enclosure Device ID: 252
Slot Number: 1
Drive's position: DiskGroup: 0, Span: 0, Arm: 1
Enclosure position: N/A
Device Id: 1
WWN: 50025385700191c6
Sequence Number: 2
Media Error Count: 0
Other Error Count: 0
Predictive Failure Count: 0
Last Predictive Failure Event Seq Number: 0
PD Type: SATA
Raw Size: 223.570 GB [0x1bf244b0 Sectors]
Non Coerced Size: 223.070 GB [0x1be244b0 Sectors]
Coerced Size: 222.585 GB [0x1bd2c000 Sectors]
Sector Size: 512
Logical Sector Size: 512
Physical Sector Size: 512
Firmware state: Online, Spun Up
Commissioned Spare : No
Emergency Spare : No
Device Firmware Level: 203Q
Shield Counter: 0
Successful diagnostics completion on : N/A
SAS Address(0): 0x4433221101000000
Connected Port Number: 1(path0)
Inquiry Data: S1G0NWAG600294 SAMSUNG MZ7WD240HCFV-00003 DXM9203Q
FDE Capable: Not Capable
FDE Enable: Disable
Secured: Unsecured
Locked: Unlocked
Needs EKM Attention: No
Foreign State: None
Device Speed: 6.0Gb/s
Link Speed: 6.0Gb/s
Media Type: Solid State Device
Drive: Not Certified
Drive Temperature :33C (91.40 F)
PI Eligibility: No
Drive is formatted for PI information: No
PI: No PI
Drive's NCQ setting : Enabled
Port-0 :
Port status: Active
Port's Linkspeed: 6.0Gb/s
Drive has flagged a S.M.A.R.T alert : No
Enclosure Device ID: 252
Slot Number: 2
Drive's position: DiskGroup: 0, Span: 1, Arm: 0
Enclosure position: N/A
Device Id: 2
WWN: 50025385700191c2
Sequence Number: 2
Media Error Count: 0
Other Error Count: 0
Predictive Failure Count: 0
Last Predictive Failure Event Seq Number: 0
PD Type: SATA
Raw Size: 223.570 GB [0x1bf244b0 Sectors]
Non Coerced Size: 223.070 GB [0x1be244b0 Sectors]
Coerced Size: 222.585 GB [0x1bd2c000 Sectors]
Sector Size: 512
Logical Sector Size: 512
Physical Sector Size: 512
Firmware state: Online, Spun Up
Commissioned Spare : No
Emergency Spare : No
Device Firmware Level: 203Q
Shield Counter: 0
Successful diagnostics completion on : N/A
SAS Address(0): 0x4433221102000000
Connected Port Number: 2(path0)
Inquiry Data: S1G0NWAG600290 SAMSUNG MZ7WD240HCFV-00003 DXM9203Q
FDE Capable: Not Capable
FDE Enable: Disable
Secured: Unsecured
Locked: Unlocked
Needs EKM Attention: No
Foreign State: None
Device Speed: 6.0Gb/s
Link Speed: 6.0Gb/s
Media Type: Solid State Device
Drive: Not Certified
Drive Temperature :33C (91.40 F)
PI Eligibility: No
Drive is formatted for PI information: No
PI: No PI
Drive's NCQ setting : Enabled
Port-0 :
Port status: Active
Port's Linkspeed: 6.0Gb/s
Drive has flagged a S.M.A.R.T alert : No
Enclosure Device ID: 252
Slot Number: 3
Drive's position: DiskGroup: 0, Span: 1, Arm: 1
Enclosure position: N/A
Device Id: 3
WWN: 50025385700191b7
Sequence Number: 2
Media Error Count: 0
Other Error Count: 0
Predictive Failure Count: 0
Last Predictive Failure Event Seq Number: 0
PD Type: SATA
Raw Size: 223.570 GB [0x1bf244b0 Sectors]
Non Coerced Size: 223.070 GB [0x1be244b0 Sectors]
Coerced Size: 222.585 GB [0x1bd2c000 Sectors]
Sector Size: 512
Logical Sector Size: 512
Physical Sector Size: 512
Firmware state: Online, Spun Up
Commissioned Spare : No
Emergency Spare : No
Device Firmware Level: 203Q
Shield Counter: 0
Successful diagnostics completion on : N/A
SAS Address(0): 0x4433221103000000
Connected Port Number: 3(path0)
Inquiry Data: S1G0NWAG600279 SAMSUNG MZ7WD240HCFV-00003 DXM9203Q
FDE Capable: Not Capable
FDE Enable: Disable
Secured: Unsecured
Locked: Unlocked
Needs EKM Attention: No
Foreign State: None
Device Speed: 6.0Gb/s
Link Speed: 6.0Gb/s
Media Type: Solid State Device
Drive: Not Certified
Drive Temperature :35C (95.00 F)
PI Eligibility: No
Drive is formatted for PI information: No
PI: No PI
Drive's NCQ setting : Enabled
Port-0 :
Port status: Active
Port's Linkspeed: 6.0Gb/s
Drive has flagged a S.M.A.R.T alert : No
Enclosure Device ID: 252
Slot Number: 4
Drive's position: DiskGroup: 1, Span: 0, Arm: 0
Enclosure position: N/A
Device Id: 4
WWN: 5000c5004f547de9
Sequence Number: 2
Media Error Count: 0
Other Error Count: 0
Predictive Failure Count: 0
Last Predictive Failure Event Seq Number: 0
PD Type: SATA
Raw Size: 931.512 GB [0x74706db0 Sectors]
Non Coerced Size: 931.012 GB
这个问题的根本原因是 Oracle MySQL 在 5.5.46 / 5.6.27 中的回归是由http://bugs.mysql.com/bug.php?id=76135的修复引起的,Percona Server 将尽快发布修复(使用https://bugs.launchpad.net/bugs/1519094用于跟踪)。
编辑:Oracle 错误是https://bugs.mysql.com/bug.php?id=79185
自适应刷新设置并不是错误的,尽管此设置的某些值比其他值更有可能引发错误。MariaDB 不受影响,因为他们之前已经修复了根本问题(https://mariadb.atlassian.net/browse/MDEV-7026)。
整个故事相当技术性,更多地与低级系统编程有关,而不是与数据库本身有关。Bug 76135 是关于 InnoDB 互斥原语对于 ARM64 不正确的问题。已通过使用适当的编译器屏障来纠正此问题,以确保互斥体字加载/存储与受该互斥体保护的关键部分之间的正确顺序。但 InnoDB 互斥体不仅仅是一个锁字,而且这些屏障变得太弱,无法通过其他互斥体字段来排序锁字访问。这是由 MariaDB 的 Kristian Nielsen 首先分析的,可以在https://lists.launchpad.net/maria-developers/msg07860.html上阅读。
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