我有一个数据框,我想通过匹配另一个数据框来更改列名称。
包含数据和列名称的示例数据框:
df <- data.frame("Gene_Symbol" = c("Gene1","Gene2","Gene3","Gene4","Gene5","Gene6","Gene7"),
"Sample1" = c(85657.97656,54417.78906,110949.3281,53197.45313,87156.80469,NA,23880.2832),
"Sample2" = c(10423.40918,41660.73047,40094.54688,49519.78125,129387.1094,NA,23903.25977),
"Sample3" = c(18778.68359,43655.79688,NA,57447.08984,113266.1484,44810.26172,26316.6543),
"Sample4" = c(23919.53125,47829.02344,NA,51478.58203,116275.3359,43110.94922,25417.45508),
"Sample5" = c(NA,46677.20313,63389.45313,48722.15234,NA,77135.52344,40265.6875),
"Sample6" = c(NA,68596.22656,56802.60938,44712.64063,NA,47744.17969,33689.62891),
"Sample7" = c(NA,80506.14844,48722.99219,38629.00781,NA,37885,36638.02344))
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我想用来从样本交换到上面 df 中的肿瘤编号。
df2 <- data.frame("Sample_name" = c("Sample1","Sample2","Sample3","Sample4","Sample5","Sample6", "Sample7"), "Tumor_name" = c("Tumor56", "Tumor17", "Tumor99", "Tumor2", "Tumor34", "Tumor84", "Tumor51"))
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我在dplyr中找到了一种方法,见下文,但感觉很精细。有更容易的方法吗?
library(tidyverse)
df %>%
column_to_rownames("Gene_Symbol")%>% # Bring Gene_Symbol to row name before transpose
t()%>% # Transpose to be able to use join
data.frame()%>% # Transpose makes a matrix - make dataframe again
rownames_to_column("Sample_name")%>% # …Run Code Online (Sandbox Code Playgroud)