有思想的Python中的线程FFT

bdf*_*bes 5 python multithreading fft enthought intel-mkl

Numpy / SciPy中的快速傅立叶变换(FFT)未进行线程化。Enthought Python随Intel MKL数值库一起提供,该库可进行线程化FFT。如何获得这些例程?

bdf*_*bes 2

新的改进版本,可处理输入和输出数组中的任意步幅。默认情况下,这个数组现在不在位并创建一个新数组。它模仿 Numpy FFT 例程,只是它具有不同的标准化。

''' Wrapper to MKL FFT routines '''

import numpy as _np
import ctypes as _ctypes

mkl = _ctypes.cdll.LoadLibrary("mk2_rt.dll")
_DFTI_COMPLEX = _ctypes.c_int(32)
_DFTI_DOUBLE = _ctypes.c_int(36)
_DFTI_PLACEMENT = _ctypes.c_int(11)
_DFTI_NOT_INPLACE = _ctypes.c_int(44)
_DFTI_INPUT_STRIDES = _ctypes.c_int(12)
_DFTI_OUTPUT_STRIDES = _ctypes.c_int(13)

def fft2(a, out=None):
    ''' 
Forward two-dimensional double-precision complex-complex FFT.
Uses the Intel MKL libraries distributed with Enthought Python.
Normalisation is different from Numpy!
By default, allocates new memory like 'a' for output data.
Returns the array containing output data.
'''

    assert a.dtype == _np.complex128
    assert len(a.shape) == 2

    inplace = False

    if out is a:
        inplace = True

    elif out is not None:
        assert out.dtype == _np.complex128
        assert a.shape == out.shape
        assert not _np.may_share_memory(a, out)

    else:
        out = _np.empty_like(a)

    Desc_Handle = _ctypes.c_void_p(0)
    dims = (_ctypes.c_int*2)(*a.shape)

    mkl.DftiCreateDescriptor(_ctypes.byref(Desc_Handle), _DFTI_DOUBLE, _DFTI_COMPLEX, _ctypes.c_int(2), dims )

    #Set input strides if necessary
    if not a.flags['C_CONTIGUOUS']:
        in_strides = (_ctypes.c_int*3)(0, a.strides[0]/16, a.strides[1]/16)
        mkl.DftiSetValue(Desc_Handle, _DFTI_INPUT_STRIDES, _ctypes.byref(in_strides))

    if inplace:
        #Inplace FFT
        mkl.DftiCommitDescriptor(Desc_Handle)
        mkl.DftiComputeForward(Desc_Handle, a.ctypes.data_as(_ctypes.c_void_p) )

    else:
        #Not-inplace FFT
        mkl.DftiSetValue(Desc_Handle, _DFTI_PLACEMENT, _DFTI_NOT_INPLACE)

        #Set output strides if necessary
        if not out.flags['C_CONTIGUOUS']:
            out_strides = (_ctypes.c_int*3)(0, out.strides[0]/16, out.strides[1]/16)
            mkl.DftiSetValue(Desc_Handle, _DFTI_OUTPUT_STRIDES, _ctypes.byref(out_strides))

        mkl.DftiCommitDescriptor(Desc_Handle)
        mkl.DftiComputeForward(Desc_Handle, a.ctypes.data_as(_ctypes.c_void_p), out.ctypes.data_as(_ctypes.c_void_p) )

    mkl.DftiFreeDescriptor(_ctypes.byref(Desc_Handle))

    return out

def ifft2(a, out=None):
    ''' 
Backward two-dimensional double-precision complex-complex FFT.
Uses the Intel MKL libraries distributed with Enthought Python.
Normalisation is different from Numpy!
By default, allocates new memory like 'a' for output data.
Returns the array containing output data.
'''

    assert a.dtype == _np.complex128
    assert len(a.shape) == 2

    inplace = False

    if out is a:
        inplace = True

    elif out is not None:
        assert out.dtype == _np.complex128
        assert a.shape == out.shape
        assert not _np.may_share_memory(a, out)

    else:
        out = _np.empty_like(a)

    Desc_Handle = _ctypes.c_void_p(0)
    dims = (_ctypes.c_int*2)(*a.shape)

    mkl.DftiCreateDescriptor(_ctypes.byref(Desc_Handle), _DFTI_DOUBLE, _DFTI_COMPLEX, _ctypes.c_int(2), dims )

    #Set input strides if necessary
    if not a.flags['C_CONTIGUOUS']:
        in_strides = (_ctypes.c_int*3)(0, a.strides[0]/16, a.strides[1]/16)
        mkl.DftiSetValue(Desc_Handle, _DFTI_INPUT_STRIDES, _ctypes.byref(in_strides))

    if inplace:
        #Inplace FFT
        mkl.DftiCommitDescriptor(Desc_Handle)
        mkl.DftiComputeBackward(Desc_Handle, a.ctypes.data_as(_ctypes.c_void_p) )

    else:
        #Not-inplace FFT
        mkl.DftiSetValue(Desc_Handle, _DFTI_PLACEMENT, _DFTI_NOT_INPLACE)

        #Set output strides if necessary
        if not out.flags['C_CONTIGUOUS']:
            out_strides = (_ctypes.c_int*3)(0, out.strides[0]/16, out.strides[1]/16)
            mkl.DftiSetValue(Desc_Handle, _DFTI_OUTPUT_STRIDES, _ctypes.byref(out_strides))

        mkl.DftiCommitDescriptor(Desc_Handle)
        mkl.DftiComputeBackward(Desc_Handle, a.ctypes.data_as(_ctypes.c_void_p), out.ctypes.data_as(_ctypes.c_void_p) )

    mkl.DftiFreeDescriptor(_ctypes.byref(Desc_Handle))

    return out
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