PyBrain:使用numpy.loadtxt加载数据？

Question

我有一些工作代码可以正确地将csv文件中的数据加载到PyBrain数据集中:

def old_get_dataset():

    reader = csv.reader(open('test.csv', 'rb'))

    header = reader.next()
    fields = dict(zip(header, range(len(header))))
    print header

    # assume last field in csv is single target variable
    # and all other fields are input variables
    dataset = SupervisedDataSet(len(fields) - 1, 1)

    for row in reader:
        #print row[:-1]
        #print row[-1]
        dataset.addSample(row[:-1], row[-1])

    return dataset

现在我正在尝试重写此代码以使用numpy的loadtxt函数.我相信addSample可以采用numpy数组,而不必一次添加一行数据.

假设我加载的numpy数组是mxn维,那么如何将第一个mx(n-1)数据集作为第一个参数传递,最后一列数据作为第二个参数？这就是我正在尝试的:

def get_dataset():

    array = numpy.loadtxt('test.csv', delimiter=',', skiprows=1)

    # assume last field in csv is single target variable
    # and all other fields are input variables
    number_of_columns = array.shape[1]
    dataset = SupervisedDataSet(number_of_columns - 1, 1)

    #print array[0]
    #print array[:,:-1]
    #print array[:,-1]
    dataset.addSample(array[:,:-1], array[:,-1])

    return dataset

但是我收到以下错误:

Traceback (most recent call last):
  File "C:\test.py", line 109, in <module>
    (d, n, t) = main()
  File "C:\test.py", line 87, in main
    ds = get_dataset()
  File "C:\test.py", line 45, in get_dataset
    dataset.addSample(array[:,:-1], array[:,-1])
  File "C:\Python27\lib\site-packages\pybrain\datasets\supervised.py",
       line 45, in addSample self.appendLinked(inp, target)
  File "C:\Python27\lib\site-packages\pybrain\datasets\dataset.py",
       line 215, in appendLinked self._appendUnlinked(l, args[i])
  File "C:\Python27\lib\site-packages\pybrain\datasets\dataset.py",
       line 197, in _appendUnlinked self.data[label][self.endmarker[label], :] = row
ValueError: output operand requires a reduction, but reduction is not enabled

我怎样才能解决这个问题？

Answer 1

经过大量实验和重新读取数据集文档后,以下运行没有错误:

def get_dataset():

    array = numpy.loadtxt('test.csv', delimiter=',', skiprows=1)

    # assume last field in csv is single target variable
    # and all other fields are input variables
    number_of_columns = array.shape[1]
    dataset = SupervisedDataSet(number_of_columns - 1, 1)

    print array[0]
    #print array[:,:-1]
    #print array[:,-1]
    #dataset.addSample(array[:,:-1], array[:,-1])
    #dataset.addSample(array[:,:-1], array[:,-2:-1])
    dataset.setField('input', array[:,:-1])
    dataset.setField('target', array[:,-1:])

    return dataset

我必须仔细检查它是否做得对.