data.table 与最小/最大连接值的非等值连接

r2e*_*ans 5 r data.table non-equi-join

我正在尝试进行非等值连接data.table并提取该连接中连接值的最小值/最大值。

set.seed(42)
dtA <- data.table(id=rep(c("A","B"),each=3), start=rep(1:3, times=2), end=rep(2:4, times=2))
dtB <- data.table(id=rep(c("A","B"),times=20), time=sort(runif(40, 1, 4)))
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time我想保留介于startend(以及 on )之间的最小/最大值id。名义上,这只是一个非等值连接,但我找不到by=.EACHI或的组合mult="..."来获得我想要的东西。相反,最小值/最大值通常与我需要的范围不一致。不幸的roll=是不支持非等值范围。

dtA[dtB, c("Min", "Max") := .(min(time), max(time)),
    on = .(id, start <= time, end > time), mult = "first"]
#        id start   end      Min      Max
#    <char> <int> <int>    <num>    <num>
# 1:      A     1     2 1.011845 3.966675
# 2:      A     2     3 1.011845 3.966675
# 3:      A     3     4 1.011845 3.966675
# 4:      B     1     2 1.011845 3.966675
# 5:      B     2     3 1.011845 3.966675
# 6:      B     3     4 1.011845 3.966675
dtA[dtB, c("Min", "Max") := .(min(time), max(time)),
    on = .(id, start <= time, end > time), by = .EACHI]
#        id start   end      Min      Max
#    <char> <int> <int>    <num>    <num>
# 1:      A     1     2 1.858419 1.858419
# 2:      A     2     3 2.970977 2.970977
# 3:      A     3     4 3.934679 3.934679
# 4:      B     1     2 1.766286 1.766286
# 5:      B     2     3 2.925237 2.925237
# 6:      B     3     4 3.966675 3.966675
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第二个是最接近的(“Max”是正确的),但我希望能够得到的是:

       id start   end      Min      Max
   <char> <num> <int>    <num>    <num>
1:      A     1     2 1.011845 1.858419
2:      A     2     3 2.170610 2.970977
3:      A     3     4 3.115194 3.934679
4:      B     1     2 1.022002 1.766286
5:      B     2     3 2.164325 2.925237
6:      B     3     4 3.055509 3.966675
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真正的问题有大约 400K 左右的行,其范围加入了 2Mi 行的值,因此我宁愿不对两个帧进行完全扩展,而是手动将其缩小到dtA.

(我愿意接受collapse建议。)

the*_*ail 5

切换连接,使其成为B[A],然后在内部分配A

dtA[,
    c("min","max") := dtB[
        dtA,
        on=.(id, time >= start, time < end), 
        .(min=min(x.time), max=max(x.time)),
        by=.EACHI][, c("min","max")]
    ]
dtA

#       id start   end      min      max
#   <char> <int> <int>    <num>    <num>
#1:      A     1     2 1.011845 1.858419
#2:      A     2     3 2.170610 2.970977
#3:      A     3     4 3.115194 3.934679
#4:      B     1     2 1.022002 1.766286
#5:      B     2     3 2.164325 2.925237
#6:      B     3     4 3.055509 3.966675
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您可以看到它需要旋转,否则该.EACHI组最终将针对每个单独的行而不是条件内的B匹配行:BA

dtB[dtA, on=.(id, time >= start, time < end), .N, by=.EACHI]
#       id  time  time     N
#   <char> <int> <int> <int>
#1:      A     1     2     5
#2:      A     2     3     6
#3:      A     3     4     9
#4:      B     1     2     4
#5:      B     2     3     6
#6:      B     3     4    10

dtA[dtB, on=.(id, start <= time, end > time), .N, by=.EACHI][, .(freq=.N), by=N]
#       N  freq
#   <int> <int>
#1:     1    40
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这在描述的上下文中是有意义的help("data.table::special-symbols")

它的用法是“by=.EACHI”(或“keyby=.EACHI”),它调用 按每个行进行分组

DT[i, j, by]逻辑中,dtA然后需要为分组提供行。