在 R studio 中安装包“ncdf4”失败

Question

我正在尝试安装一个名为“ncdf4”的 R 软件包。\n我已尝试将其安装在 R-studio 界面的“packages”部分，但也尝试输入install.packages("ncdf4")控制台。

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这是我在两种情况下得到的输出：

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Installing package into \xe2\x80\x98/home/user/R/x86_64-pc-linux-gnu-library/3.6\xe2\x80\x99\n(as \xe2\x80\x98lib\xe2\x80\x99 is unspecified)\ntrying URL \'https://cloud.r-project.org/src/contrib/ncdf4_1.17.tar.gz\'\nContent type \'application/x-gzip\' length 124458 bytes (121 KB)\n==================================================\ndownloaded 121 KB\n\n* installing *source* package \xe2\x80\x98ncdf4\xe2\x80\x99 ...\n** package \xe2\x80\x98ncdf4\xe2\x80\x99 successfully unpacked and MD5 sums checked\n** using staged installation\nconfigure.ac: starting\nchecking for nc-config... no\n-----------------------------------------------------------------------------------\nError, nc-config not found or not executable.  This is a script that comes with the\nnetcdf library, version 4.1-beta2 or later, and must be present for configuration\nto succeed.\n\nIf you installed the netcdf library (and nc-config) in a standard location, nc-config\nshould be found automatically.  Otherwise, you can specify the full path and name of\nthe nc-config script by passing the --with-nc-config=/full/path/nc-config argument\nflag to the configure script.  For example:\n\n./configure --with-nc-config=/sw/dist/netcdf4/bin/nc-config\n\nSpecial note for R users:\n-------------------------\nTo pass the configure flag to R, use something like this:\n\nR CMD INSTALL --configure-args="--with-nc-config=/home/joe/bin/nc-config" ncdf4\n\nwhere you should replace /home/joe/bin etc. with the location where you have\ninstalled the nc-config script that came with the netcdf 4 distribution.\n-----------------------------------------------------------------------------------\nERROR: configuration failed for package \xe2\x80\x98ncdf4\xe2\x80\x99\n* removing \xe2\x80\x98/home/user/R/x86_64-pc-linux-gnu-library/3.6/ncdf4\xe2\x80\x99\nWarning in install.packages :\n  installation of package \xe2\x80\x98ncdf4\xe2\x80\x99 had non-zero exit status\n\nThe downloaded source packages are in\n    \xe2\x80\x98/tmp/RtmpXcbO2y/downloaded_packages\xe2\x80\x99\n

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有人能够从我提供的代码中破译出什么问题吗？\n谢谢。

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Answer 1

我正在使用 Ubuntu 20.4 并遇到了同样的问题。

第 1 步：在终端中

sudo apt-get update -y

第2步：在终端中

sudo apt-get install -y libnetcdf-dev

第 3 步：在 RStudio 中

install.packages("ncdf4")

之后ncdf4就安装成功了。

参考： https://zoomadmin.com/HowToInstall/UbuntuPackage/libnetcdf-dev