spa*_*row 9 r pandoc knitr pander
我知道这是一个相当古老的问题,之前已经讨论过,但我无法按预期工作.
我有一个降价的文件,我想用knitr和pander生产用两位小数,如0.12,3.60,14.00,或163.21与一致的数字格式的.docx报告都内嵌和块输出.我已阅读此主题如何避免在每个\ Sexpr {}中使用round()?建议pander可以自动执行此操作.但是,它似乎对我不起作用.请让我知道我在这里缺少什么.
剧本:
```{r, echo=FALSE}
library(knitr)
opts_chunk$set(echo = FALSE, message = FALSE, results = 'asis')
```
```{r}
require(pander)
panderOptions('digits' , 2) #this should do the trick, right?
```
Test
=====
Let's produce some test stats:
```{r}
model1 = lm(weight~feed, chickwts)
anova.m1 = anova(model1)
pander(anova.m1)
pander(coef(summary(model1)))
```
In-line R codes: "Type of food affects body mass of the chicks
(F~`r anova.m1$Df[1]`,`r anova.m1$Df[2]`~ = `r anova.m1$F[1]`, p = `r anova.m1$Pr[1]`)."
```{r}
FILE <- "Test"
system(paste0("pandoc -o ", FILE, ".docx ", FILE, ".md"))
```
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但结果并不是我所期望的(请注意,小数范围几乎是0到7之间的所有内容):

你有没有尝试过
options(scipen=1, digits=2)
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如http://yihui.name/knitr/demo/output/?
关于什么:
> library(pander)
> panderOptions('digits', 2)
> panderOptions('round', 2)
> panderOptions('keep.trailing.zeros', TRUE)
> pander(anova.m1)
----------------------------------------------------------
Df Sum Sq Mean Sq F value Pr(>F)
--------------- ---- -------- --------- --------- --------
**feed** 5 231129 46226 15 0
**Residuals** 65 195556 3009
----------------------------------------------------------
Table: Analysis of Variance Table
> pander(coef(summary(model1)))
----------------------------------------------------------------
Estimate Std. Error t value Pr(>|t|)
------------------- ---------- ------------ --------- ----------
**(Intercept)** 323.58 15.83 20.44 0.00
**feedhorsebean** -163.38 23.49 -6.96 0.00
**feedlinseed** -104.83 22.39 -4.68 0.00
**feedmeatmeal** -46.67 22.90 -2.04 0.05
**feedsoybean** -77.15 21.58 -3.58 0.00
**feedsunflower** 5.33 22.39 0.24 0.81
----------------------------------------------------------------
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关于内联R块:也可以pander在那里调用或应用一些钩子来自动完成.
更新:在设置小数位数后,无需在此处设置位数,sry:
> library(pander)
> panderOptions('round', 2)
> panderOptions('keep.trailing.zeros', TRUE)
> model1 = lm(weight~feed, chickwts)
> anova.m1 = anova(model1)
> pander(anova.m1)
----------------------------------------------------------
Df Sum Sq Mean Sq F value Pr(>F)
--------------- ---- -------- --------- --------- --------
**feed** 5 231129 46226 15.36 0
**Residuals** 65 195556 3009
----------------------------------------------------------
Table: Analysis of Variance Table
> pander(coef(summary(model1)))
----------------------------------------------------------------
Estimate Std. Error t value Pr(>|t|)
------------------- ---------- ------------ --------- ----------
**(Intercept)** 323.58 15.83 20.44 0.00
**feedhorsebean** -163.38 23.49 -6.96 0.00
**feedlinseed** -104.83 22.39 -4.68 0.00
**feedmeatmeal** -46.67 22.90 -2.04 0.05
**feedsoybean** -77.15 21.58 -3.58 0.00
**feedsunflower** 5.33 22.39 0.24 0.81
----------------------------------------------------------------
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进一步更新:为什么它digits适用于第一次运行的第二个表中的set :
> format(c(0.01, 15.36 ), digits = 2)
[1] " 0.01" "15.36"
> format(15.36, digits = 2)
[1] "15"
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并以列为基础pandoc.table运行format,以便TRUE根据用户请求,列中的数字将具有相同的小数位数(即使设置为该选项的尾随零).
如果这看起来像一个bug,请在GitHub上打开一个问题:https://github.com/Rapporter/pander